nf-core_modules/tests/modules/seacr/callpeak/test.yml

- name: seacr callpeak
  command: nextflow run ./tests/modules/seacr/callpeak -entry test_seacr_callpeak -c tests/config/nextflow.config
  tags:
    - seacr
    - seacr/callpeak
  files:
    - path: output/seacr/test_1.stringent.bed
      md5sum: a3cb0c7c4ffa895788da3f0d6371b7df

- name: seacr callpeak threshold
  command: nextflow run ./tests/modules/seacr/callpeak -entry test_seacr_callpeak_threshold -c tests/config/nextflow.config
  tags:
    - seacr
    - seacr/callpeak
  files:
    - path: output/seacr/test_1.stringent.bed
      md5sum: 1d23015c7087f7b48cc3139d53fd3463
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`- name: seacr callpeak`
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml 2021-07-07 09:10:18 +00:00			`command: nextflow run ./tests/modules/seacr/callpeak -entry test_seacr_callpeak -c tests/config/nextflow.config`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`tags:`
			`- seacr`
Lint modules ci (#389) * ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-04-08 08:10:52 +00:00			`- seacr/callpeak`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`files:`
			`- path: output/seacr/test_1.stringent.bed`
I accidently deleted a branch before the PR merged for PR 800 (#881) * hifiasm copied from fastqc * hifiasm tests init from fastqc * meta.yml init; test.yml and main.nf for printing version * Add hifiasm version printing * Removed spaced on an empty line * Reverted hifiasm from main * Updated seacr callpeak to include a control threshold * Whitespace Co-authored-by: Sviatoslav Sidorov <sviatoslav.sidorov@crick.ac.uk> Co-authored-by: Svyatoslav Sidorov <svet.sidorov@gmail.com> 2021-10-21 11:28:59 +00:00			`md5sum: a3cb0c7c4ffa895788da3f0d6371b7df`

			`- name: seacr callpeak threshold`
			`command: nextflow run ./tests/modules/seacr/callpeak -entry test_seacr_callpeak_threshold -c tests/config/nextflow.config`
			`tags:`
			`- seacr`
			`- seacr/callpeak`
			`files:`
			`- path: output/seacr/test_1.stringent.bed`
			`md5sum: 1d23015c7087f7b48cc3139d53fd3463`