nf-core_modules/tests/modules/unicycler/test.yml

- name: unicycler test_unicycler_single_end
  command: nextflow run tests/modules/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config
  tags:
    - unicycler
  files:
    - path: output/unicycler/test.assembly.gfa.gz
    - path: output/unicycler/test.scaffolds.fa.gz
    - path: output/unicycler/test.unicycler.log
      contains:
        - "Assembly complete"

- name: unicycler test_unicycler_paired_end
  command: nextflow run tests/modules/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config
  tags:
    - unicycler
  files:
    - path: output/unicycler/test.assembly.gfa.gz
    - path: output/unicycler/test.scaffolds.fa.gz
    - path: output/unicycler/test.unicycler.log
      contains:
        - "Assembly complete"

- name: unicycler test_unicycler_shortreads_longreads
  command: nextflow run tests/modules/unicycler -entry test_unicycler_shortreads_longreads -c tests/config/nextflow.config
  tags:
    - unicycler
  files:
    - path: output/unicycler/test.assembly.gfa.gz
    - path: output/unicycler/test.scaffolds.fa.gz
    - path: output/unicycler/test.unicycler.log
      contains:
        - "Assembly complete"
Unicycler with long read input (#1041) * Unicycler with long read input * tests and md5sums * remove unstable md5sums * Update modules/unicycler/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-11-15 11:48:56 +00:00			`- name: unicycler test_unicycler_single_end`
			`command: nextflow run tests/modules/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config`
Adding unicycler module (#307) * Adding unicycler module * Do not forget to change default keywords on meta.yml 2021-03-22 17:14:24 +00:00			`tags:`
			`- unicycler`
			`files:`
Unicycler with long read input (#1041) * Unicycler with long read input * tests and md5sums * remove unstable md5sums * Update modules/unicycler/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-11-15 11:48:56 +00:00			`- path: output/unicycler/test.assembly.gfa.gz`
			`- path: output/unicycler/test.scaffolds.fa.gz`
Adding unicycler module (#307) * Adding unicycler module * Do not forget to change default keywords on meta.yml 2021-03-22 17:14:24 +00:00			`- path: output/unicycler/test.unicycler.log`
			`contains:`
			`- "Assembly complete"`

Unicycler with long read input (#1041) * Unicycler with long read input * tests and md5sums * remove unstable md5sums * Update modules/unicycler/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-11-15 11:48:56 +00:00			`- name: unicycler test_unicycler_paired_end`
			`command: nextflow run tests/modules/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config`
Adding unicycler module (#307) * Adding unicycler module * Do not forget to change default keywords on meta.yml 2021-03-22 17:14:24 +00:00			`tags:`
			`- unicycler`
			`files:`
Unicycler with long read input (#1041) * Unicycler with long read input * tests and md5sums * remove unstable md5sums * Update modules/unicycler/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-11-15 11:48:56 +00:00			`- path: output/unicycler/test.assembly.gfa.gz`
			`- path: output/unicycler/test.scaffolds.fa.gz`
			`- path: output/unicycler/test.unicycler.log`
			`contains:`
			`- "Assembly complete"`

			`- name: unicycler test_unicycler_shortreads_longreads`
			`command: nextflow run tests/modules/unicycler -entry test_unicycler_shortreads_longreads -c tests/config/nextflow.config`
			`tags:`
			`- unicycler`
			`files:`
			`- path: output/unicycler/test.assembly.gfa.gz`
			`- path: output/unicycler/test.scaffolds.fa.gz`
Adding unicycler module (#307) * Adding unicycler module * Do not forget to change default keywords on meta.yml 2021-03-22 17:14:24 +00:00			`- path: output/unicycler/test.unicycler.log`
			`contains:`
			`- "Assembly complete"`