mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
14 lines
371 B
Text
14 lines
371 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { VARIANTBAM } from '../../../modules/variantbam/main.nf' addParams( options: [args: '-m 1'] )
|
||
|
|
|
||
|
|
workflow test_variantbam {
|
||
|
|
|
||
|
|
input = [ [ id:'test', single_end:false ],
|
||
|
|
file(params.test_data['sarscov2']['illumina']['test_paired_end_sorted_bam'], checkIfExists: true) ]
|
||
|
|
|
||
|
|
VARIANTBAM ( input )
|
||
|
|
}
|