2022-09-08 04:05:57 -04:00
|
|
|
- name: epang test_epang
|
|
|
|
|
command: nextflow run ./tests/modules/epang -entry test_epang -c ./tests/config/nextflow.config -c ./tests/modules/epang/nextflow.config
|
|
|
|
|
tags:
|
|
|
|
|
- epang
|
|
|
|
|
files:
|
|
|
|
|
- path: output/epang/test.epa_info.log
|
|
|
|
|
contains:
|
|
|
|
|
- "INFO 3 Sequences done"
|
2022-09-09 03:54:03 -04:00
|
|
|
- path: output/epang/test.epa_result.jplace.gz
|
2022-09-08 04:05:57 -04:00
|
|
|
contains:
|
|
|
|
|
- '"placements":'
|
|
|
|
|
- '"metadata": {"invocation": "epa-ng --model LG --threads 2 --query query.alnfaa.gz --ref-msa reference.alnfaa.gz --tree reference.newick "}'
|
