nf-core_modules/tests/config/nextflow.config

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params {
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outdir = "output/"
publish_dir_mode = "copy"
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enable_conda = false
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singularity_pull_docker_container = false
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}
process {
cpus = 2
memory = 6.GB
time = 48.h
}
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if ("$PROFILE" == "singularity") {
singularity.enabled = true
singularity.autoMounts = true
} else if ("$PROFILE" == "conda") {
params.enable_conda = true
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} else {
docker.enabled = true
docker.runOptions = '-u \$(id -u):\$(id -g)'
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}