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nf-core_modules/tests/modules/entrezdirect/xtract/test.yml

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new (fixed) module: entrezdirect/xtract (#1926) * first commit: module files * last version main.nf * modules/entrezdirect/xtract/meta.yml * updated file * updated test * Update modules/entrezdirect/xtract/main.nf changed name of output file Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/entrezdirect/xtract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/entrezdirect/xtract/main.nf Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> * Update tests/modules/entrezdirect/xtract/main.nf Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> * updated test, removed esummary input file Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
2022-07-26 14:58:49 +00:00
- name: entrezdirect xtract test_entrezdirect_xtract_assembly
command: nextflow run ./tests/modules/entrezdirect/xtract -entry test_entrezdirect_xtract_assembly -c ./tests/config/nextflow.config -c ./tests/modules/entrezdirect/xtract/nextflow.config
tags:
- entrezdirect/xtract
- entrezdirect
files:
- path: output/entrezdirect/test_assembly.xml
md5sum: 32f81147eea61df5814e87c2df1092a9
- name: entrezdirect xtract test_entrezdirect_xtract_genome
command: nextflow run ./tests/modules/entrezdirect/xtract -entry test_entrezdirect_xtract_genome -c ./tests/config/nextflow.config -c ./tests/modules/entrezdirect/xtract/nextflow.config
tags:
- entrezdirect/xtract
- entrezdirect
files:
- path: output/entrezdirect/test_genome.xml
md5sum: af6242f231bdc147d6197edfd0954585
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