2021-11-21 09:47:16 +00:00
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## TODO nf-core: Please run the following command to build this file:
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# nf-core modules create-test-yml maxquant/lfq
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- name: maxquant lfq
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2021-12-17 11:34:28 +00:00
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# command: nextflow run ./tests/modules/maxquant/lfq -entry test_maxquant_lfq --paramfile ./tests/modules/maxquant/lfq/mqpar.xml --raw 'https://github.com/wombat-p/MaxQuant-Workflow/raw/dev/Nextflow/data_test/OVEMB150205_{12,14}.raw' --fasta 'https://github.com/wombat-p/MaxQuant-Workflow/raw/dev/Nextflow/data_test/ABRF_iPRG_2012_target.fasta' -c tests/config/nextflow.config
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command: nextflow run ./tests/modules/maxquant/lfq -entry test_maxquant_lfq --paramfile ./tests/modules/maxquant/lfq/mqpar.xml --fasta 'https://raw.githubusercontent.com/wombat-p/MaxQuant-Workflow/dev/data/yeast_UPS.fasta' -c tests/config/nextflow.config
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2021-11-21 09:47:16 +00:00
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tags:
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- maxquant
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- maxquant/lfq
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files:
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- path: output/maxquant/proteinGroups.txt
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2021-12-20 07:36:32 +00:00
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md5sum: 02e70e7b08d8548fa64e41b0d70216bc
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