2021-02-03 16:02:58 +00:00
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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2021-07-07 09:10:18 +00:00
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include { UCSC_BEDGRAPHTOBIGWIG } from '../../../../modules/ucsc/bedgraphtobigwig/main.nf' addParams( options: [:] )
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2021-02-03 16:02:58 +00:00
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workflow test_ucsc_bedgraphtobigwig {
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input = [ [ id:'test' ], // meta map
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2021-04-09 12:47:05 +00:00
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[ file(params.test_data['sarscov2']['illumina']['test_bedgraph'], checkIfExists: true) ]
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2021-03-24 09:53:41 +00:00
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]
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2021-04-09 12:47:05 +00:00
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sizes = file(params.test_data['sarscov2']['genome']['genome_sizes'], checkIfExists: true)
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2021-03-24 09:53:41 +00:00
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UCSC_BEDGRAPHTOBIGWIG ( input, sizes )
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2021-02-03 16:02:58 +00:00
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}
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