nf-core_modules/modules/stringtie/merge/meta.yml

name: stringtie_merge
description: Merges the annotation gtf file and the stringtie output gtf files
keywords:
    - merge
    - gtf
    - reference
tools:
    - stringtie2:
        description: |
            Transcript assembly and quantification for RNA-Seq
        homepage: https://ccb.jhu.edu/software/stringtie/index.shtml
        documentation: https://ccb.jhu.edu/software/stringtie/index.shtml?t=manual
input:
    - stringtie_gtf:
        type: file
        description: |
            Stringtie transcript gtf output(s).
        pattern: "*.gtf"
    - annotation_gtf:
        type: file
        description: |
            Annotation gtf file.
        pattern: "*.gtf"
output:
    - merged_gtf:
        type: map
        description: |
            Merged gtf from annotation and stringtie output gtfs.
        pattern: "*.gtf"
    - versions:
        type: file
        description: File containing software versions
        pattern: "versions.yml"

authors:
    - "@yuukiiwa"