2021-05-25 21:12:10 +00:00
|
|
|
name: genmap_index
|
|
|
|
|
description: create index file for genmap
|
|
|
|
|
keywords:
|
|
|
|
|
- index
|
|
|
|
|
tools:
|
|
|
|
|
- genmap:
|
|
|
|
|
description: Ultra-fast computation of genome mappability.
|
|
|
|
|
homepage: https://github.com/cpockrandt/genmap
|
|
|
|
|
documentation: https://github.com/cpockrandt/genmap
|
|
|
|
|
tool_dev_url: https://github.com/cpockrandt/genmap
|
|
|
|
|
doi: "10.1093/bioinformatics/btaa222"
|
2022-02-15 11:15:27 +00:00
|
|
|
licence: ["BSD-3-Clause"]
|
2021-05-25 21:12:10 +00:00
|
|
|
|
|
|
|
|
input:
|
|
|
|
|
- fasta:
|
|
|
|
|
type: file
|
|
|
|
|
description: fasta file
|
|
|
|
|
pattern: "*.{fasta,fa}"
|
|
|
|
|
|
|
|
|
|
output:
|
2021-10-03 07:20:26 +00:00
|
|
|
- versions:
|
2021-05-25 21:12:10 +00:00
|
|
|
type: file
|
2021-10-03 07:20:26 +00:00
|
|
|
description: File containing software versions
|
2021-09-27 08:41:24 +00:00
|
|
|
pattern: "versions.yml"
|
2021-05-25 21:12:10 +00:00
|
|
|
- index:
|
|
|
|
|
type: index
|
|
|
|
|
description: Genmap index file
|
|
|
|
|
pattern: "{index}.*"
|
|
|
|
|
|
|
|
|
|
authors:
|
|
|
|
|
- "@jianhong"
|
