nf-core_modules/tests/software/nextclade/test.yml

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- name: nextclade test_nextclade_json
command: nextflow run tests/software/nextclade -entry test_nextclade_json -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.json
md5sum: cab92830c5cb66076e7d6c054ea98362
- name: nextclade test_nextclade_csv
command: nextflow run tests/software/nextclade -entry test_nextclade_csv -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.csv
md5sum: 4f7096df9be51f99a0d62a38653b29cf
- name: nextclade test_nextclade_tsv
command: nextflow run tests/software/nextclade -entry test_nextclade_tsv -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.tsv
md5sum: fe07dc4ffcd81742ca9bef93f88e8836
- name: nextclade test_nextclade_tree
command: nextflow run tests/software/nextclade -entry test_nextclade_tree -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.tree.json
md5sum: 5c57dd724bc2b5cfde8f42a17ff2865a