mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
20 lines
627 B
Text
20 lines
627 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { PANAROO_RUN } from '../../../../modules/panaroo/run/main.nf'
|
||
|
|
|
||
|
|
workflow test_panaroo_run {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
[ id:'test', single_end:false ], // meta map
|
||
|
|
[
|
||
|
|
file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['test1_gff'], checkIfExists: true),
|
||
|
|
file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['test2_gff'], checkIfExists: true),
|
||
|
|
file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['test3_gff'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
]
|
||
|
|
|
||
|
|
PANAROO_RUN ( input )
|
||
|
|
}
|