nf-core_modules/tests/modules/gatk4/markduplicates/test.yml

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- name: gatk4 markduplicates test_gatk4_markduplicates
command: nextflow run tests/modules/gatk4/markduplicates -entry test_gatk4_markduplicates -c tests/config/nextflow.config -c ./tests/modules/gatk4/markduplicates/nextflow.config
tags:
- gatk4
- gatk4/markduplicates
files:
- path: output/gatk4/test.bai
md5sum: e9c125e82553209933883b4fe2b8d7c2
- path: output/gatk4/test.bam
md5sum: 2efd50b2e6b7fd9bdf242cd9e266cfa9
- path: output/gatk4/test.metrics
- path: output/gatk4/versions.yml
md5sum: 0bc949aaa8792cd6c537cdaab0e2c145
- name: gatk4 markduplicates test_gatk4_markduplicates_multiple_bams
command: nextflow run tests/modules/gatk4/markduplicates -entry test_gatk4_markduplicates_multiple_bams -c tests/config/nextflow.config -c ./tests/modules/gatk4/markduplicates/nextflow.config
tags:
- gatk4
- gatk4/markduplicates
files:
- path: output/gatk4/test.bai
md5sum: bad71df9c876e72a5bc0a3e0fd755f92
- path: output/gatk4/test.bam
md5sum: 8187febc6108ffef7f907e89b9c091a4
- path: output/gatk4/test.metrics
- path: output/gatk4/versions.yml
md5sum: b10d63cf7b2b672915cb30cea081ccd5