nf-core_modules/modules/tiddit/sv/meta.yml

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name: tiddit_sv
description: Identify chromosomal rearrangements.
keywords:
- structural
- variants
- vcf
tools:
- sv:
description: Search for structural variants.
homepage: https://github.com/SciLifeLab/TIDDIT
documentation: https://github.com/SciLifeLab/TIDDIT/blob/master/README.md
doi: 10.12688/f1000research.11168.1
licence: ['GPL-3.0-or-later']
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input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fasta:
type: file
description: Input FASTA file
pattern: "*.{fasta,fa}"
- fai:
type: file
description: FASTA index file
pattern: "*.{fai}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- vcf:
type: file
description: vcf
pattern: "*.{vcf}"
- ploidy:
type: file
description: tab
pattern: "*.{ploidy.tab}"
- signals:
type: file
description: tab
pattern: "*.{signals.tab}"
- versions:
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type: file
description: File containing software versions
pattern: "versions.yml"
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authors:
- "@maxulysse"