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16 lines
503 B
Text
16 lines
503 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { MINIASM } from '../../../modules/miniasm/main.nf' addParams( options: [suffix:'.assembly'] )
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workflow test_miniasm {
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input = [ [ id:'test', single_end:true ], // meta map
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file(params.test_data['bacteroides_fragilis']['nanopore']['test_fastq_gz'], checkIfExists: true),
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file(params.test_data['bacteroides_fragilis']['nanopore']['overlap_paf'], checkIfExists: true)
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]
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MINIASM ( input )
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}
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