2021-02-01 17:53:31 +00:00
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name: bowtie_build
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2020-12-08 12:40:32 +00:00
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description: Create bowtie index for reference genome
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keywords:
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- index
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- fasta
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- genome
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- reference
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tools:
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- bowtie:
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2020-12-18 08:50:05 +00:00
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description: |
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bowtie is a software package for mapping DNA sequences against
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a large reference genome, such as the human genome.
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homepage: http://bowtie-bio.sourceforge.net/index.shtml
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documentation: http://bowtie-bio.sourceforge.net/manual.shtml
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arxiv: arXiv:1303.3997
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2020-12-08 12:40:32 +00:00
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input:
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- fasta:
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2020-12-18 08:50:05 +00:00
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type: file
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description: Input genome fasta file
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2020-12-08 12:40:32 +00:00
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output:
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- index:
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2020-12-18 08:50:05 +00:00
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type: file
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description: Bowtie genome index files
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pattern: "*.ebwt"
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2021-10-03 07:20:26 +00:00
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- versions:
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2020-12-18 08:50:05 +00:00
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type: file
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2021-10-03 07:20:26 +00:00
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description: File containing software versions
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2021-09-27 08:41:24 +00:00
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pattern: "versions.yml"
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2020-12-08 12:40:32 +00:00
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authors:
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- "@kevinmenden"
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2021-02-01 17:53:31 +00:00
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- "@drpatelh"
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