nf-core_modules/tests/modules/bcftools/isec/main.nf

#!/usr/bin/env nextflow

nextflow.enable.dsl = 2

include { BCFTOOLS_ISEC } from '../../../../modules/bcftools/isec/main.nf' addParams( options: ['args': '--nfiles +2 --output-type z --no-version'] )

workflow test_bcftools_isec {
    input = [ [ id:'test' ], // meta map
              [ file(params.test_data['sarscov2']['illumina']['test_vcf_gz'], checkIfExists: true),
                file(params.test_data['sarscov2']['illumina']['test2_vcf_gz'], checkIfExists: true)],
              [ file(params.test_data['sarscov2']['illumina']['test_vcf_gz_tbi'], checkIfExists: true),
                file(params.test_data['sarscov2']['illumina']['test2_vcf_gz_tbi'], checkIfExists: true)]
            ]

    BCFTOOLS_ISEC ( input )
}