2022-03-01 08:29:46 -05:00
|
|
|
- name: stranger test_stranger
|
|
|
|
|
command: nextflow run tests/modules/stranger -entry test_stranger -c tests/config/nextflow.config
|
|
|
|
|
tags:
|
|
|
|
|
- stranger
|
|
|
|
|
files:
|
|
|
|
|
- path: output/expansionhunter/test.vcf
|
|
|
|
|
md5sum: cfd4a1d35c0e469b99eb6aaa6d22de76
|
|
|
|
|
- path: output/expansionhunter/versions.yml
|
|
|
|
|
md5sum: f3962a6eecfddf9682414c0f605a885a
|
|
|
|
|
- path: output/stranger/test.vcf.gz
|
2022-04-19 04:53:39 -04:00
|
|
|
md5sum: 68b0ca1319851134ffa8793a4704dc11
|
2022-03-01 08:29:46 -05:00
|
|
|
- path: output/stranger/versions.yml
|
|
|
|
|
md5sum: 5ec35fd835fb1be50bc3e7c004310fc0
|
2022-04-19 04:53:39 -04:00
|
|
|
|
|
|
|
|
- name: stranger test_stranger_without_optional_variant_catalog
|
|
|
|
|
command: nextflow run tests/modules/stranger -entry test_stranger_without_optional_variant_catalog -c tests/config/nextflow.config
|
|
|
|
|
tags:
|
|
|
|
|
- stranger
|
|
|
|
|
files:
|
|
|
|
|
- path: output/expansionhunter/test.vcf
|
|
|
|
|
md5sum: cfd4a1d35c0e469b99eb6aaa6d22de76
|
|
|
|
|
- path: output/expansionhunter/versions.yml
|
|
|
|
|
md5sum: c95af9e6d8cd9bd2ce1090ca4e7a6020
|
|
|
|
|
- path: output/stranger/test.vcf.gz
|
|
|
|
|
md5sum: bbe15159195681d5c18596d3ad85c78f
|
|
|
|
|
- path: output/stranger/versions.yml
|
|
|
|
|
md5sum: 8558542a007e90ea5dcdceed3f12585d
|
2022-04-22 04:10:43 -04:00
|
|
|
|
|
|
|
|
- name: stranger test_stranger_without_optional_variant_catalog_stubs
|
|
|
|
|
command: nextflow run tests/modules/stranger -entry test_stranger_without_optional_variant_catalog -c tests/config/nextflow.config -stub-run
|
|
|
|
|
tags:
|
|
|
|
|
- stranger
|
|
|
|
|
files:
|
|
|
|
|
- path: output/expansionhunter/test.vcf
|
|
|
|
|
- path: output/expansionhunter/versions.yml
|
|
|
|
|
- path: output/stranger/test.vcf.gz
|
|
|
|
|
- path: output/stranger/versions.yml
|
