mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 19:18:17 +00:00
31 lines
606 B
YAML
31 lines
606 B
YAML
|
name: bwa_index
|
||
|
|
on:
|
||
|
|
push:
|
||
|
|
paths:
|
||
|
|
- software/bwa/index/**
|
||
|
|
- .github/workflows/bwa_index.yml
|
||
|
|
- tests
|
||
|
|
pull_request:
|
||
|
|
paths:
|
||
|
|
- software/bwa/index/**
|
||
|
|
- .github/workflows/bwa_index.yml
|
||
|
|
- tests
|
||
|
|
|
||
|
|
jobs:
|
||
|
|
ci_test:
|
||
|
|
runs-on: ubuntu-latest
|
||
|
|
env:
|
||
|
|
NXF_ANSI_LOG: false
|
||
|
|
steps:
|
||
|
|
|
||
|
|
- uses: actions/checkout@v2
|
||
|
|
|
||
|
|
- name: Install Nextflow
|
||
|
|
run: |
|
||
|
|
export NXF_VER="20.07.1"
|
||
|
|
wget -qO- get.nextflow.io | bash
|
||
|
|
sudo mv nextflow /usr/local/bin/
|
||
|
|
|
||
|
|
# Test the module
|
||
|
|
- run: nextflow run ./software/bwa/index/test/ -profile docker
|