nf-core_modules/tests/software/fgbio/callmolecularconsensusreads/test.yml

- name: fgbio callmolecularconsensusreads
  command: nextflow run tests/software/fgbio/callmolecularconsensusreads -entry test_fgbio_callmolecularconsensusreads -c tests/config/nextflow.config
  tags:
    - fgbio_callmolecularconsensusreads
    - fgbio
  files:
    - path: output/fgbio/test_molreads.bam
      md5sum: 7010bcdc037c36af13dbc370c06c76d3
    - path: output/fgbio/test_out.bam
      md5sum: d84e28fecc90c0752c543e934f10aa31
New modules: Fgbio callmolecularconsensusreads and sortbam (#352) * Added fgbio callmolecularconsensusreads and sortbam modules * Fixed naming issue in meta.yml * fix: test.yml and config lint * Revert "fix: test.yml and config lint" This reverts commit 0453bc3a8dc3dab6997442a4349ee2241adcc380, which caused the sortbam tests to fail. * style: Fix test names * style: Remove trailing whitespace * fixed test.yml * fix: test data in sortbam * fix: data format * fix: test data for callmolecularconsensusreads * Corrected with updated test data * Apply suggestions from code review Applied changes from code review, mainly syntactical changes Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Sruthi Suresh <sps180004@ganymede.utdallas.edu> Co-authored-by: Edmund Miller <edmund.a.miller@protonmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-03-28 19:38:50 +00:00			`- name: fgbio callmolecularconsensusreads`
			`command: nextflow run tests/software/fgbio/callmolecularconsensusreads -entry test_fgbio_callmolecularconsensusreads -c tests/config/nextflow.config`
			`tags:`
			`- fgbio_callmolecularconsensusreads`
			`- fgbio`
			`files:`
			`- path: output/fgbio/test_molreads.bam`
			`md5sum: 7010bcdc037c36af13dbc370c06c76d3`
			`- path: output/fgbio/test_out.bam`
			`md5sum: d84e28fecc90c0752c543e934f10aa31`