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18 lines
342 B
Text
18 lines
342 B
Text
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process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName: UMITOOLS_EXTRACT {
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ext.args = '--bc-pattern="NNNN"'
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}
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withName: UMITOOLS_DEDUP {
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ext.args = ''
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ext.prefix = 'dedup'
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}
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withName: BWA_MEM {
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ext.args2 = ''
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}
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}
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