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21 lines
632 B
Text
21 lines
632 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { SEQKIT_SPLIT2 } from '../../../../software/SEQKIT/SPLIT2/main.nf' addParams( options: [:] )
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workflow test_seqkit_split2_single_end {
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def input = []
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input = [ [ id:'test', single_end:true ], // meta map
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file("${launchDir}/tests/data/dna/SRR396636_R1.fastq.gz", checkIfExists: true) ]
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SEQKIT_SPLIT2 ( input )
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}
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workflow test_seqkit_split2_paired_end {
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def input = []
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input = [ [ id:'test', single_end:false ], // meta map
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file("${launchDir}/tests/data/dna/SRR396636_*", checkIfExists: true) ]
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SEQKIT_SPLIT2 ( input )
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}
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