nf-core_modules/tests/software/preseq/lcextrap/test.yml

- name: preseq lcextrap single-end
  command: nextflow run ./tests/software/preseq/lcextrap -entry test_preseq_single_end -c tests/config/nextflow.config
  tags:
    - preseq
    - preseq/lcextrap
    - preseq_lcextrap_single_end
  files:
    - path: output/preseq/test.ccurve.txt
      md5sum: 76ae04c8eaf19c94e3210bb69da38498
    - path: output/preseq/test.command.log

- name: preseq lcextrap paired-end
  command: nextflow run ./tests/software/preseq/lcextrap -entry test_preseq_paired_end -c tests/config/nextflow.config
  tags:
    - preseq
    - preseq/lcextrap
    - preseq_lcextrap_paired_end
  files:
    - path: output/preseq/test.ccurve.txt
      md5sum: 2836d2fabd2213f097fd7063db550276
    - path: output/preseq/test.command.log
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`- name: preseq lcextrap single-end`
Change path to tests 2021-02-03 16:44:56 +00:00			`command: nextflow run ./tests/software/preseq/lcextrap -entry test_preseq_single_end -c tests/config/nextflow.config`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`tags:`
			`- preseq`
Lint modules ci (#389) * ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-04-08 08:10:52 +00:00			`- preseq/lcextrap`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`- preseq_lcextrap_single_end`
			`files:`
Fix preseq tests 2021-02-03 17:28:44 +00:00			`- path: output/preseq/test.ccurve.txt`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`md5sum: 76ae04c8eaf19c94e3210bb69da38498`
Fix preseq tests 2021-02-03 17:28:44 +00:00			`- path: output/preseq/test.command.log`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00
			`- name: preseq lcextrap paired-end`
Change path to tests 2021-02-03 16:44:56 +00:00			`command: nextflow run ./tests/software/preseq/lcextrap -entry test_preseq_paired_end -c tests/config/nextflow.config`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`tags:`
			`- preseq`
Lint modules ci (#389) * ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-04-08 08:10:52 +00:00			`- preseq/lcextrap`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`- preseq_lcextrap_paired_end`
			`files:`
Fix preseq tests 2021-02-03 17:28:44 +00:00			`- path: output/preseq/test.ccurve.txt`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`md5sum: 2836d2fabd2213f097fd7063db550276`
Fix preseq tests 2021-02-03 17:28:44 +00:00			`- path: output/preseq/test.command.log`