mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 19:18:17 +00:00
48 lines
1.4 KiB
YAML
48 lines
1.4 KiB
YAML
|
name: prodigal
|
||
|
|
## TODO nf-core: Add a description of the module and list keywords
|
||
|
|
description: write your description here
|
||
|
|
keywords:
|
||
|
|
- sort
|
||
|
|
tools:
|
||
|
|
- prodigal:
|
||
|
|
## TODO nf-core: Add a description and other details for the software below
|
||
|
|
description: Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program
|
||
|
|
homepage: {}
|
||
|
|
documentation: {}
|
||
|
|
tool_dev_url: {}
|
||
|
|
doi: ""
|
||
|
|
licence: ['GPL v3']
|
||
|
|
|
||
|
|
## TODO nf-core: Add a description of all of the variables used as input
|
||
|
|
input:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test', single_end:false ]
|
||
|
|
## TODO nf-core: Delete / customise this example input
|
||
|
|
- bam:
|
||
|
|
type: file
|
||
|
|
description: BAM/CRAM/SAM file
|
||
|
|
pattern: "*.{bam,cram,sam}"
|
||
|
|
|
||
|
|
## TODO nf-core: Add a description of all of the variables used as output
|
||
|
|
output:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test', single_end:false ]
|
||
|
|
- version:
|
||
|
|
type: file
|
||
|
|
description: File containing software version
|
||
|
|
pattern: "*.{version.txt}"
|
||
|
|
## TODO nf-core: Delete / customise this example output
|
||
|
|
- bam:
|
||
|
|
type: file
|
||
|
|
description: Sorted BAM/CRAM/SAM file
|
||
|
|
pattern: "*.{bam,cram,sam}"
|
||
|
|
|
||
|
|
authors:
|
||
|
|
- "@grst"
|