nf-core_modules/tests/modules/motus/profile/test.yml

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- name: motus profile test_motus_profile_single_end
command: nextflow run tests/modules/motus/profile -entry test_motus_profile_single_end -c tests/config/nextflow.config
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tags:
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- motus
- motus/profile
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files:
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- path: output/motus/test.out
contains: ["#consensus_taxonomy\ttest"]
- name: motus profile test_motus_profile_paired_end
command: nextflow run tests/modules/motus/profile -entry test_motus_profile_paired_end -c tests/config/nextflow.config
tags:
- motus
- motus/profile
files:
- path: output/motus/test.out
contains: ["#consensus_taxonomy\ttest"]