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nf-core_modules/tests/software/bcftools/consensus/test.yml

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update test data paths (#373) * update test data paths * Update test md5sums * gatk test fixes & update variantfiltration main * few extra fixes after review * fix suspected format error * Update software/gatk4/variantfiltration/main.nf * Update software/gatk4/variantfiltration/main.nf * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-03-24 18:14:11 +00:00
- name: bcftools consensus test_bcftools_consensus
command: nextflow run tests/software/bcftools/consensus -entry test_bcftools_consensus -c tests/config/nextflow.config
Rearranging tests to test each module separately
2021-02-08 14:16:51 +00:00
tags:
- bcftools_consensus
update test data paths (#373) * update test data paths * Update test md5sums * gatk test fixes & update variantfiltration main * few extra fixes after review * fix suspected format error * Update software/gatk4/variantfiltration/main.nf * Update software/gatk4/variantfiltration/main.nf * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-03-24 18:14:11 +00:00
- bcftools
Rearranging tests to test each module separately
2021-02-08 14:16:51 +00:00
files:
- path: output/bcftools/test.fa
Exchange VCF data by sarscov2 data (#261) * added sarscov2 vcf data; adjusted bcftools tests * updated README.md * deleted old VCF files; fixed mergevcfs * fixed tabix
2021-03-09 09:04:08 +00:00
md5sum: e57d3e4d113f989bc069c5fd61627091
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