2021-02-08 14:16:51 +00:00
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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2021-11-26 07:58:40 +00:00
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include { TABIX_BGZIP } from '../../../../modules/tabix/bgzip/main.nf'
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2021-02-08 14:16:51 +00:00
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2022-04-20 14:26:56 +00:00
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workflow test_tabix_bgzip_compress {
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2021-02-08 14:16:51 +00:00
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input = [ [ id:'test' ], // meta map
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2021-04-01 19:22:06 +00:00
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[ file(params.test_data['sarscov2']['illumina']['test_vcf'], checkIfExists: true) ]
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2021-03-24 09:53:41 +00:00
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]
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2021-02-08 14:16:51 +00:00
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2021-02-16 22:30:06 +00:00
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TABIX_BGZIP ( input )
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2021-02-08 14:16:51 +00:00
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}
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2022-04-20 14:26:56 +00:00
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workflow test_tabix_bgzip_decompress {
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input = [ [ id:'test' ], // meta map
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[ file(params.test_data['sarscov2']['genome']['test_bed_gz'], checkIfExists: true) ]
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]
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TABIX_BGZIP ( input )
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}
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