2021-04-30 08:18:11 -04:00
|
|
|
name: minimap2_index
|
|
|
|
|
description: Provides fasta index required by minimap2 alignment.
|
|
|
|
|
keywords:
|
|
|
|
|
- index
|
|
|
|
|
- fasta
|
|
|
|
|
- reference
|
|
|
|
|
tools:
|
|
|
|
|
- minimap2:
|
|
|
|
|
description: |
|
|
|
|
|
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
|
|
|
|
|
homepage: https://github.com/lh3/minimap2
|
|
|
|
|
documentation: https://github.com/lh3/minimap2#uguide
|
|
|
|
|
input:
|
|
|
|
|
- fasta:
|
|
|
|
|
type: file
|
|
|
|
|
description: |
|
|
|
|
|
Reference database in FASTA format.
|
|
|
|
|
output:
|
|
|
|
|
- mmi:
|
|
|
|
|
type: file
|
|
|
|
|
description: Minimap2 fasta index.
|
|
|
|
|
pattern: "*.mmi"
|
|
|
|
|
- version:
|
|
|
|
|
type: file
|
|
|
|
|
description: File containing software version
|
|
|
|
|
pattern: "*.{version.txt}"
|
|
|
|
|
authors:
|
|
|
|
|
- "@yuukiiwa"
|
2021-04-30 10:57:43 -04:00
|
|
|
- "@drpatelh"
|
