nf-core_modules/software/bedtools/intersectbed/meta.yml

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2020-07-14 14:17:23 +00:00
name: bedtools intersect
description: Returns the overlapping features between two sets of genomics features
keywords:
- intersect,bed,bedtools
tools:
- bedtools:
description: |
Bedtools is a software package that provides with a toolset to perform genome arithmetic operations.
homepage: https://bedtools.readthedocs.io/en/latest/index.html
documentation: https://bedtools.readthedocs.io/en/latest/index.html
doi: 10.093/bioinformatics/btq033
input:
-
- input_file_1:
type: file
description: Input genomic coordinates file
pattern: "*.{bam,bed,BED,gff,vcf}"
- input_file_2:
type: file
description: Input genomic coordinates file
pattern: "*.{bam,bed,BED,gff,vcf}"
output:
-
- index:
type: stdout,file
description:
pattern: "stdout,*.{bed,BED}"
authors:
- "@JoseEspinosa"