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26 lines
522 B
Text
26 lines
522 B
Text
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#!/usr/bin/env nextflow
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nextflow.preview.dsl = 2
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// Test -l, -r provided.
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include { BEDTOOLS_SLOP } from '../main.nf' addParams( options: [publish_dir:'test_bed_file'] )
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// Define input channels
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// Run the workflow
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workflow test_bed_file {
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def input = []
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input = [ [ id:'test', l:1, r:10 ],
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[ file("${baseDir}/input/A.bed", checkIfExists: true),] ]
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BEDTOOLS_SLOP(
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input,
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file("${baseDir}/input/genome.sizes", checkIfExists: true)
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)
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}
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workflow {
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test_bed_file()
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}
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