2021-02-03 16:02:58 +00:00
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- name: picard collectmultiplemetrics
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2021-02-03 16:44:56 +00:00
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command: nextflow run ./tests/software/picard/collectmultiplemetrics -entry test_picard_collectmultiplemetrics -c tests/config/nextflow.config
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2021-02-03 16:02:58 +00:00
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tags:
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- picard
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- picard_collectmultiplemetrics
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files:
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# These can't be md5'd consistently
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- path: output/picard/test.CollectMultipleMetrics.alignment_summary_metrics
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- path: output/picard/test.CollectMultipleMetrics.base_distribution_by_cycle.pdf
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- path: output/picard/test.CollectMultipleMetrics.base_distribution_by_cycle_metrics
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- path: output/picard/test.CollectMultipleMetrics.insert_size_histogram.pdf
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- path: output/picard/test.CollectMultipleMetrics.insert_size_metrics
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- path: output/picard/test.CollectMultipleMetrics.quality_by_cycle.pdf
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- path: output/picard/test.CollectMultipleMetrics.quality_by_cycle_metrics
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- path: output/picard/test.CollectMultipleMetrics.quality_distribution.pdf
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- path: output/picard/test.CollectMultipleMetrics.quality_distribution_metrics
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