mirror of
https://github.com/MillironX/nf-core_modules.git
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30 lines
1.2 KiB
YAML
30 lines
1.2 KiB
YAML
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- name: gatk4 applybqsr test_gatk4_applybqsr_spark
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command: nextflow run tests/modules/gatk4/applybqsrspark -entry test_gatk4_applybqsr_spark -c tests/config/nextflow.config -c ./tests/modules/gatk4/applybqsrspark/nextflow.config
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tags:
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- gatk4
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- gatk4/applybqsrspark
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files:
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- path: output/gatk4/test.bam
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md5sum: d088422be886dc8507ff97fcc7dd968a
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- path: output/gatk4/versions.yml
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- name: gatk4 applybqsr test_gatk4_applybqsr_spark_intervals
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command: nextflow run tests/modules/gatk4/applybqsrspark -entry test_gatk4_applybqsr_spark_intervals -c tests/config/nextflow.config -c ./tests/modules/gatk4/applybqsrspark/nextflow.config
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tags:
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- gatk4
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- gatk4/applybqsrspark
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files:
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- path: output/gatk4/test.bam
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md5sum: 4bfa18d651abd945e240b05e70107716
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- path: output/gatk4/versions.yml
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- name: gatk4 applybqsr test_gatk4_applybqsr_spark_cram
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command: nextflow run tests/modules/gatk4/applybqsrspark -entry test_gatk4_applybqsr_spark_cram -c tests/config/nextflow.config -c ./tests/modules/gatk4/applybqsrspark/nextflow.config
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tags:
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- gatk4
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- gatk4/applybqsrspark
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files:
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- path: output/gatk4/test.cram
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md5sum: 2e0bca197af4f043a4a85152e6edbe04
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- path: output/gatk4/versions.yml
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