nf-core_modules/modules/minimap2/index/meta.yml

name: minimap2_index
description: Provides fasta index required by minimap2 alignment.
keywords:
  - index
  - fasta
  - reference
tools:
  - minimap2:
      description: |
        A versatile pairwise aligner for genomic and spliced nucleotide sequences.
      homepage: https://github.com/lh3/minimap2
      documentation: https://github.com/lh3/minimap2#uguide
      licence: ["MIT"]
input:
  - fasta:
      type: file
      description: |
        Reference database in FASTA format.
output:
  - mmi:
      type: file
      description: Minimap2 fasta index.
      pattern: "*.mmi"
  - versions:
      type: file
      description: File containing software versions
      pattern: "versions.yml"
authors:
  - "@yuukiiwa"
  - "@drpatelh"
add minimap2 index module (#467) 2021-04-30 12:18:11 +00:00			`name: minimap2_index`
			`description: Provides fasta index required by minimap2 alignment.`
			`keywords:`
Fix formatting in yaml files, add yamllint config (#1279) * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2022-02-15 11:15:27 +00:00			`- index`
			`- fasta`
			`- reference`
add minimap2 index module (#467) 2021-04-30 12:18:11 +00:00			`tools:`
Fix formatting in yaml files, add yamllint config (#1279) * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2022-02-15 11:15:27 +00:00			`- minimap2:`
			`description: \|`
			`A versatile pairwise aligner for genomic and spliced nucleotide sequences.`
			`homepage: https://github.com/lh3/minimap2`
			`documentation: https://github.com/lh3/minimap2#uguide`
			`licence: ["MIT"]`
add minimap2 index module (#467) 2021-04-30 12:18:11 +00:00			`input:`
Fix formatting in yaml files, add yamllint config (#1279) * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2022-02-15 11:15:27 +00:00			`- fasta:`
			`type: file`
			`description: \|`
			`Reference database in FASTA format.`
add minimap2 index module (#467) 2021-04-30 12:18:11 +00:00			`output:`
Fix formatting in yaml files, add yamllint config (#1279) * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2022-02-15 11:15:27 +00:00			`- mmi:`
			`type: file`
			`description: Minimap2 fasta index.`
			`pattern: "*.mmi"`
			`- versions:`
			`type: file`
			`description: File containing software versions`
			`pattern: "versions.yml"`
add minimap2 index module (#467) 2021-04-30 12:18:11 +00:00			`authors:`
Fix formatting in yaml files, add yamllint config (#1279) * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2022-02-15 11:15:27 +00:00			`- "@yuukiiwa"`
			`- "@drpatelh"`