nf-core_modules/tests/modules/angsd/docounts/test.yml

- name: angsd docounts test_angsd_docounts
  command: nextflow run ./tests/modules/angsd/docounts -entry test_angsd_docounts -c ./tests/config/nextflow.config  -c ./tests/modules/angsd/docounts/nextflow.config
  tags:
    - angsd/docounts
    - angsd
  files:
    - path: output/angsd/test.counts.gz
      contains: ["ind0TotDepth"]
    - path: output/angsd/test.icnts.gz
    - path: output/angsd/test.pos.gz
      contains: ["chr	pos	totDepth"]
Add: ANGSD_DOCOUNTS (#2044) * Update main.nf * Update meta.yml * Re-add logos as not staged in a way that works with MultiQC config files * Add ANGSD doCounts * Prettier * Update main.nf * Apply suggestions from code review * Apply suggestions from code review * Apply suggestions from code review * Try loosening test due to conda * Remove md5 for binary file Co-authored-by: Simon Pearce <24893913+SPPearce@users.noreply.github.com> 2022-09-27 11:21:44 +00:00			`- name: angsd docounts test_angsd_docounts`
			`command: nextflow run ./tests/modules/angsd/docounts -entry test_angsd_docounts -c ./tests/config/nextflow.config -c ./tests/modules/angsd/docounts/nextflow.config`
			`tags:`
			`- angsd/docounts`
			`- angsd`
			`files:`
			`- path: output/angsd/test.counts.gz`
			`contains: ["ind0TotDepth"]`
			`- path: output/angsd/test.icnts.gz`
			`- path: output/angsd/test.pos.gz`
			`contains: ["chr pos totDepth"]`