nf-core_modules/tests/modules/maxquant/lfq/main.nf

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2021-11-21 09:47:16 +00:00
#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { MAXQUANT_LFQ } from '../../../../modules/maxquant/lfq/main.nf' addParams( options: [:] )
workflow test_maxquant_lfq {
input = [ [ id:'test' ], // meta map
file(params.fasta, checkIfExists: true), file(params.paramfile, checkIfExists: true) ]
rawfiles = file(params.raw)
MAXQUANT_LFQ ( input, rawfiles.collect())
}