mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 03:28:17 +00:00
14 lines
354 B
Text
14 lines
354 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { DEDUP } from '../../../modules/dedup/main.nf' addParams( options: [args: "-m"] )
|
||
|
|
|
||
|
|
workflow test_dedup {
|
||
|
|
|
||
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
||
|
|
file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true) ]
|
||
|
|
|
||
|
|
DEDUP ( input )
|
||
|
|
}
|