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nf-core_modules/tests/software/bcftools/merge/test.yml

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update test data paths (#373) * update test data paths * Update test md5sums * gatk test fixes & update variantfiltration main * few extra fixes after review * fix suspected format error * Update software/gatk4/variantfiltration/main.nf * Update software/gatk4/variantfiltration/main.nf * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-03-24 18:14:11 +00:00
- name: bcftools merge test_bcftools_merge
command: nextflow run tests/software/bcftools/merge -entry test_bcftools_merge -c tests/config/nextflow.config
Add bcftools merge module
2021-02-12 23:08:57 +00:00
tags:
- bcftools_merge
update test data paths (#373) * update test data paths * Update test md5sums * gatk test fixes & update variantfiltration main * few extra fixes after review * fix suspected format error * Update software/gatk4/variantfiltration/main.nf * Update software/gatk4/variantfiltration/main.nf * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-03-24 18:14:11 +00:00
- bcftools
Add bcftools merge module
2021-02-12 23:08:57 +00:00
files:
- path: output/bcftools/test.vcf.gz
Exchange VCF data by sarscov2 data (#261) * added sarscov2 vcf data; adjusted bcftools tests * updated README.md * deleted old VCF files; fixed mergevcfs * fixed tabix
2021-03-09 09:04:08 +00:00
md5sum: 52165fc4149c61547e63800b876c9661
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