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nf-core_modules/tests/modules/samtools/mpileup/test.yml

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Mpileup also likes intervals (#1445) * Mpileup also likes intervals * Also update meta yml with inclusive input and intervals Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com> Co-authored-by: Maxime U. Garcia <max.u.garcia@gmail.com>
2022-03-25 06:46:51 +00:00
- name: samtools mpileup test_samtools_mpileup
command: nextflow run tests/modules/samtools/mpileup -entry test_samtools_mpileup -c tests/config/nextflow.config
Restructure tests to run individually for each module
2021-02-03 16:02:58 +00:00
tags:
- samtools
Lint modules ci (#389) * ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-08 08:10:52 +00:00
- samtools/mpileup
Restructure tests to run individually for each module
2021-02-03 16:02:58 +00:00
files:
Mpileup also likes intervals (#1445) * Mpileup also likes intervals * Also update meta yml with inclusive input and intervals Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com> Co-authored-by: Maxime U. Garcia <max.u.garcia@gmail.com>
2022-03-25 06:46:51 +00:00
- path: output/samtools/test.mpileup
nf-core modules bump-versions for all modules (#630) * Add blacklist of modules that shouldn't be updated to .nf-core.yml * nf-core modules bump-versions for all modules * Remove TODO statements identified by linting * Fix md5sums for failing tests * Fix more tests
2021-07-28 08:10:44 +00:00
md5sum: 958e6bead4103d72026f80153b6b5150
Mpileup also likes intervals (#1445) * Mpileup also likes intervals * Also update meta yml with inclusive input and intervals Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com> Co-authored-by: Maxime U. Garcia <max.u.garcia@gmail.com>
2022-03-25 06:46:51 +00:00
- path: output/samtools/versions.yml
- name: samtools mpileup test_samtools_mpileup_intervals
command: nextflow run tests/modules/samtools/mpileup -entry test_samtools_mpileup_intervals -c tests/config/nextflow.config
tags:
- samtools
- samtools/mpileup
files:
- path: output/samtools/test.mpileup
md5sum: 958e6bead4103d72026f80153b6b5150
- path: output/samtools/versions.yml
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