mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
23 lines
615 B
Text
23 lines
615 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { GENMOD_COMPOUND } from '../../../../modules/genmod/compound/main.nf'
|
||
|
|
|
||
|
|
input = [
|
||
|
|
[ id:'test', single_end:false ], // meta map
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['genmod_score_vcf_gz'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
fam = file(params.test_data['homo_sapiens']['genome']['justhusky_ped'], checkIfExists: true)
|
||
|
|
config = file(params.test_data['homo_sapiens']['illumina']['rank_model'], checkIfExists: true)
|
||
|
|
|
||
|
|
workflow test_genmod_compound {
|
||
|
|
|
||
|
|
GENMOD_COMPOUND ( input )
|
||
|
|
}
|
||
|
|
|
||
|
|
workflow test_genmod_compound_stub {
|
||
|
|
|
||
|
|
GENMOD_COMPOUND ( input )
|
||
|
|
}
|