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20 lines
627 B
Text
20 lines
627 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PANAROO_RUN } from '../../../../modules/panaroo/run/main.nf'
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workflow test_panaroo_run {
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input = [
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[ id:'test', single_end:false ], // meta map
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[
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file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['test1_gff'], checkIfExists: true),
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file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['test2_gff'], checkIfExists: true),
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file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['test3_gff'], checkIfExists: true)
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]
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]
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PANAROO_RUN ( input )
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}
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