nf-core_modules/tests/modules/fgbio/fastqtobam/test.yml

- name: fgbio fastqtobam test_fgbio_fastqtobam
  command: nextflow run tests/modules/fgbio/fastqtobam -entry test_fgbio_fastqtobam -c tests/config/nextflow.config
  tags:
    - fgbio/fastqtobam
    - fgbio
  files:
    - path: output/fgbio/test_umi_converted.bam
      md5sum: 9510735554e5eff29244077a72075fb6
    - path: output/fgbio/versions.yml
      md5sum: 524815093b96759060d0d800fc6a3f25
Rewritten module fgbio/fastqtobam (#916) * added template for fastqtobam * porting old code into new template * update with missing getprocessname function * test completed - updating all * fixed linting issues * improved reading Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de> Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de> 2021-10-27 17:06:06 +00:00			`- name: fgbio fastqtobam test_fgbio_fastqtobam`
			`command: nextflow run tests/modules/fgbio/fastqtobam -entry test_fgbio_fastqtobam -c tests/config/nextflow.config`
			`tags:`
			`- fgbio/fastqtobam`
			`- fgbio`
			`files:`
			`- path: output/fgbio/test_umi_converted.bam`
			`md5sum: 9510735554e5eff29244077a72075fb6`
			`- path: output/fgbio/versions.yml`
			`md5sum: 524815093b96759060d0d800fc6a3f25`