nf-core_modules/modules/gatk4/gatherpileupsummaries/meta.yml

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name: gatk4_gatherpileupsummaries
description: write your description here
keywords:
- sort
tools:
- gatk4:
description: Genome Analysis Toolkit (GATK4)
homepage: https://gatk.broadinstitute.org/hc/en-us
documentation: https://gatk.broadinstitute.org/hc/en-us
tool_dev_url: https://github.com/broadinstitute/gatk
doi: "10.1158/1538-7445.AM2017-3590"
licence: ["BSD-3-clause"]
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- pileup:
type: (list of) file(s)
description: Pileup files from gatk4/getpileupsummaries
pattern: "*.pileups.table"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- table:
type: file
description: Pileup file
pattern: "*.pileups.table"
authors:
- "@FriederikeHanssen"