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17 lines
539 B
Text
17 lines
539 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { CELLRANGER_MKREF } from '../../../../modules/cellranger/mkref/main.nf' addParams( options: [:] )
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workflow test_cellranger_mkref {
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fasta = file(params.test_data['homo_sapiens']['genome']['genome_fasta'], checkIfExists: true)
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gtf = file(params.test_data['homo_sapiens']['genome']['genome_gtf'], checkIfExists: true)
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reference_name = "homo_sapiens_chr22_reference"
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CELLRANGER_MKREF ( fasta,
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gtf,
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reference_name )
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}
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