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nf-core_modules/tests/software/bedtools/bamtobed/test.yml

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add bedtools bamtobed module (from nanoseq modules) (#466) * add bedtools bamtobed module * fix erros * fix linting problem
2021-04-30 12:20:31 +00:00
- name: bedtools bamtobed
command: nextflow run ./tests/software/bedtools/bamtobed -entry test_bedtools_bamtobed -c tests/config/nextflow.config
tags:
- bedtools
- bedtools/bamtobed
files:
Fixes for nanoseq modules (#479) * Fix minimap2 index module * Fix minimap2 index tests * Fix graphmap2 index module * Fix graphmap2 module * Fix ECLint * Fix bedtools bamtobed module * Fix tests for bedtools bamtobed module * Add tag for graphmap2 align module * Fix EClint * Fix qcat module * Add md5sum for graphmap2/align module * Remove non-started test data file * Remove md5sum for graphmap2 align
2021-04-30 14:57:43 +00:00
- path: ./output/bedtools/test.bed
md5sum: 3c6b88e414debd889c10eb972180b687
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