mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
15 lines
542 B
Text
15 lines
542 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { PAIRTOOLS_FLIP } from '../../../../software/pairtools/flip/main.nf' addParams( options: [:] )
|
||
|
|
|
||
|
|
workflow test_pairtools_flip {
|
||
|
|
|
||
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
||
|
|
file("https://raw.githubusercontent.com/open2c/pairtools/master/tests/data/mock.4flip.pairs", checkIfExists: true) ]
|
||
|
|
sizes = file("https://raw.githubusercontent.com/open2c/pairtools/master/tests/data/mock.chrom.sizes", checkIfExists:true)
|
||
|
|
|
||
|
|
PAIRTOOLS_FLIP ( input, sizes )
|
||
|
|
}
|