mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 02:58:17 +00:00
18 lines
686 B
Docker
18 lines
686 B
Docker
|
# Dockerfile to create container with bcl2fastq
|
||
|
|
# Push to nfcore/bcl2fastq:<VER>
|
||
|
|
|
||
|
|
FROM debian:bullseye-slim
|
||
|
|
LABEL authors="Matthias De Smet <matthias.desmet@ugent.be>" \
|
||
|
|
description="Docker image containing bcl2fastq"
|
||
|
|
# Disclaimer: this container is not provided nor supported by Illumina
|
||
|
|
# 'ps' command is needed by some nextflow executions to collect system stats
|
||
|
|
# Install procps and clean apt cache
|
||
|
|
RUN apt-get update \
|
||
|
|
&& apt-get install -y \
|
||
|
|
procps \
|
||
|
|
&& apt-get clean -y && rm -rf /var/lib/apt/lists/*
|
||
|
|
# Link hostname cmd to fix hardcoded path
|
||
|
|
RUN ln -s /bin/hostname /usr/bin/hostname
|
||
|
|
COPY bcl2fastq /usr/local/bin/bcl2fastq
|
||
|
|
RUN chmod +x /usr/local/bin/bcl2fastq
|