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22 lines
480 B
Text
22 lines
480 B
Text
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process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName: SHOVILL {
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ext.args = '--gsize 2800000 --kmers 31'
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}
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withName: SHOVILL_SKESA {
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ext.args = '--assembler skesa --gsize 2800000'
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}
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withName: SHOVILL_MEGAHIT {
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ext.args = '--assembler megahit --gsize 2800000'
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}
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withName: SHOVILL_VELVET {
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ext.args = '--assembler velvet --gsize 2800000'
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}
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}
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