2021-02-08 14:16:51 +00:00
|
|
|
#!/usr/bin/env nextflow
|
|
|
|
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
|
2021-02-16 22:29:13 +00:00
|
|
|
include { TABIX_BGZIP } from '../../../../software/tabix/bgzip/main.nf' addParams( options: [:] )
|
2021-02-08 14:16:51 +00:00
|
|
|
|
2021-02-16 23:28:32 +00:00
|
|
|
workflow test_tabix_bgzip {
|
2021-02-08 14:16:51 +00:00
|
|
|
def input = []
|
|
|
|
input = [ [ id:'test' ], // meta map
|
2021-03-09 09:04:08 +00:00
|
|
|
[ file("${launchDir}/tests/data/genomics/sarscov2/vcf/test.vcf", checkIfExists: true) ]]
|
2021-02-08 14:16:51 +00:00
|
|
|
|
2021-02-16 22:30:06 +00:00
|
|
|
TABIX_BGZIP ( input )
|
2021-02-08 14:16:51 +00:00
|
|
|
}
|