2021-01-29 00:41:49 +00:00
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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2021-02-07 21:31:02 +00:00
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include { BEDTOOLS_COMPLEMENT } from '../../../../software/bedtools/complement/main.nf' addParams( options: [suffix:'.complement'] )
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2021-01-29 00:41:49 +00:00
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workflow test_bedtools_complement {
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def input = []
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input = [ [ id:'test'],
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2021-02-07 21:31:02 +00:00
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file("${launchDir}/tests/data/bed/A.bed", checkIfExists: true) ]
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2021-01-29 00:41:49 +00:00
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2021-02-07 21:31:02 +00:00
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BEDTOOLS_COMPLEMENT ( input, file("${launchDir}/tests/data/bed/genome.sizes", checkIfExists: true) )
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2021-01-29 00:41:49 +00:00
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}
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