mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
18 lines
623 B
YAML
18 lines
623 B
YAML
|
- name: picard markduplicates on sorted bam
|
||
|
|
command: nextflow run ./tests/software/picard -entry test_picard_markduplicates_sorted_bam -c tests/config/nextflow.config
|
||
|
|
tags:
|
||
|
|
- picard
|
||
|
|
- picard_markduplicates
|
||
|
|
files:
|
||
|
|
- path: output/picard/test.MarkDuplicates.metrics.txt
|
||
|
|
- path: output/picard/test.bam
|
||
|
|
md5sum: 0ed0bfc94069380334ccd595f6d8207c
|
||
|
|
|
||
|
|
- name: picard markduplicates on unsorted bam
|
||
|
|
command: nextflow run ./tests/software/picard -entry test_picard_markduplicates_unsorted_bam -c tests/config/nextflow.config
|
||
|
|
tags:
|
||
|
|
- picard
|
||
|
|
- picard_markduplicates
|
||
|
|
- should fail
|
||
|
|
exit_code: 1
|